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package("seqan3")
set_kind("library", {headeronly = true})
set_homepage("https://www.seqan.de")
set_description("The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.")
set_license("BSD-3-Clause")
add_urls("https://github.com/seqan/seqan3/archive/refs/tags/$(version).tar.gz",
"https://github.com/seqan/seqan3.git")
add_versions("3.2.0", "80d41dd035407cfec83eb3a4466d0421adc27129af684290c0c4da31421e7276")
add_configs("cereal", {description = "required for serialisation and CTD support", default = false, type = "boolean"})
add_configs("zlib", {description = "required for *.gz and .bam file support", default = false, type = "boolean"})
add_configs("bzip2", {description = "required for *.bz2 file support", default = false, type = "boolean"})
if is_plat("windows") then
add_cxxflags("/Zc:__cplusplus")
elseif is_plat("linux") then
add_syslinks("pthread")
end
add_deps("sdsl-lite")
on_load(function (package)
if package:config("cereal") then
package:add("deps", "cereal >=1.3.1")
end
if package:config("zlib") then
package:add("deps", "zlib >=1.2")
package:add("defines", "SEQAN3_HAS_ZLIB=1")
end
if package:config("bzip2") then
package:add("deps", "bzip2 >=1.0")
package:add("defines", "SEQAN3_HAS_BZIP2=1")
end
end)
on_install("linux", "macosx", "bsd", "android", "iphoneos", "cross", function (package)
os.cp("include", package:installdir())
end)
on_test(function (package)
assert(package:check_cxxsnippets({test = [[
#include <seqan3/core/debug_stream.hpp>
void test() {
seqan3::debug_stream << "Hello World!\n";
}
]]}, {configs = {languages = "c++20"}}))
end)