* Set execute bit on files if and only if they begin with (#!).
Git only tracks the 'x' (executable) bit on each file. Prior to this
CL, our files were a random mix of executable and non-executable.
This change imposes some order by making files executable if and only
if they have shebang (#!) lines at the beginning.
We don't have any executable binaries checked into the repo, so
we shouldn't need to worry about that case.
* Added fix_permissions.sh script to set +x iff a file begins with (#!).
This pull request includes two implementation: C extension and PHP
package. Both implementations support encode/decode of singular,
repeated and map fields.