// This file is part of OpenCV project. // It is subject to the license terms in the LICENSE file found in the top-level directory // of this distribution and at http://opencv.org/license.html. /** * @file test_hdf5.cpp * @author Fangjun Kuang * @date December 2017 * */ #include // for remove() #include "test_precomp.hpp" #include using namespace cv; struct HDF5_Test : public testing::Test { virtual void SetUp() { m_filename = "test.h5"; // 0 1 2 // 3 4 5 m_single_channel.create(2, 3, CV_32F); for (size_t i = 0; i < m_single_channel.total(); i++) { ((float*)m_single_channel.data)[i] = i; } // 0 1 2 3 4 5 // 6 7 8 9 10 11 m_two_channels.create(2, 3, CV_32SC2); for (size_t i = 0; i < m_two_channels.total()*m_two_channels.channels(); i++) { ((int*)m_two_channels.data)[i] = (int)i; } } //! Remove the hdf5 file void reset() { remove(m_filename.c_str()); } String m_filename; //!< filename for testing Ptr m_hdf_io; //!< HDF5 file pointer Mat m_single_channel; //!< single channel matrix for test Mat m_two_channels; //!< two-channel matrix for test }; TEST_F(HDF5_Test, create_a_single_group) { reset(); String group_name = "parent"; m_hdf_io = hdf::open(m_filename); m_hdf_io->grcreate(group_name); EXPECT_EQ(m_hdf_io->hlexists(group_name), true); EXPECT_EQ(m_hdf_io->hlexists("child"), false); m_hdf_io->close(); } TEST_F(HDF5_Test, create_a_child_group) { reset(); String parent = "parent"; String child = parent + "/child"; m_hdf_io = hdf::open(m_filename); m_hdf_io->grcreate(parent); m_hdf_io->grcreate(child); EXPECT_EQ(m_hdf_io->hlexists(parent), true); EXPECT_EQ(m_hdf_io->hlexists(child), true); m_hdf_io->close(); } TEST_F(HDF5_Test, create_dataset) { reset(); String dataset_single_channel = "/single"; String dataset_two_channels = "/dual"; m_hdf_io = hdf::open(m_filename); m_hdf_io->dscreate(m_single_channel.rows, m_single_channel.cols, m_single_channel.type(), dataset_single_channel); m_hdf_io->dscreate(m_two_channels.rows, m_two_channels.cols, m_two_channels.type(), dataset_two_channels); EXPECT_EQ(m_hdf_io->hlexists(dataset_single_channel), true); EXPECT_EQ(m_hdf_io->hlexists(dataset_two_channels), true); std::vector dims; dims = m_hdf_io->dsgetsize(dataset_single_channel, hdf::HDF5::H5_GETDIMS); EXPECT_EQ(dims.size(), (size_t)2); EXPECT_EQ(dims[0], m_single_channel.rows); EXPECT_EQ(dims[1], m_single_channel.cols); dims = m_hdf_io->dsgetsize(dataset_two_channels, hdf::HDF5::H5_GETDIMS); EXPECT_EQ(dims.size(), (size_t)2); EXPECT_EQ(dims[0], m_two_channels.rows); EXPECT_EQ(dims[1], m_two_channels.cols); int type; type = m_hdf_io->dsgettype(dataset_single_channel); EXPECT_EQ(type, m_single_channel.type()); type = m_hdf_io->dsgettype(dataset_two_channels); EXPECT_EQ(type, m_two_channels.type()); m_hdf_io->close(); } TEST_F(HDF5_Test, write_read_dataset_1) { reset(); String dataset_single_channel = "/single"; String dataset_two_channels = "/dual"; m_hdf_io = hdf::open(m_filename); // since the dataset is under the root group, it is created by dswrite() automatically. m_hdf_io->dswrite(m_single_channel, dataset_single_channel); m_hdf_io->dswrite(m_two_channels, dataset_two_channels); EXPECT_EQ(m_hdf_io->hlexists(dataset_single_channel), true); EXPECT_EQ(m_hdf_io->hlexists(dataset_two_channels), true); // read single channel matrix Mat single; m_hdf_io->dsread(single, dataset_single_channel); EXPECT_EQ(single.type(), m_single_channel.type()); EXPECT_EQ(single.size(), m_single_channel.size()); EXPECT_NEAR(norm(single-m_single_channel), 0, 1e-10); // read dual channel matrix Mat dual; m_hdf_io->dsread(dual, dataset_two_channels); EXPECT_EQ(dual.type(), m_two_channels.type()); EXPECT_EQ(dual.size(), m_two_channels.size()); EXPECT_NEAR(norm(dual-m_two_channels), 0, 1e-10); m_hdf_io->close(); } TEST_F(HDF5_Test, write_read_dataset_2) { reset(); // create the dataset manually if it is not inside // the root group String parent = "/parent"; String dataset_single_channel = parent + "/single"; String dataset_two_channels = parent + "/dual"; m_hdf_io = hdf::open(m_filename); m_hdf_io->grcreate(parent); EXPECT_EQ(m_hdf_io->hlexists(parent), true); m_hdf_io->dscreate(m_single_channel.rows, m_single_channel.cols, m_single_channel.type(), dataset_single_channel); m_hdf_io->dscreate(m_two_channels.rows, m_two_channels.cols, m_two_channels.type(), dataset_two_channels); EXPECT_EQ(m_hdf_io->hlexists(dataset_single_channel), true); EXPECT_EQ(m_hdf_io->hlexists(dataset_two_channels), true); m_hdf_io->dswrite(m_single_channel, dataset_single_channel); m_hdf_io->dswrite(m_two_channels, dataset_two_channels); EXPECT_EQ(m_hdf_io->hlexists(dataset_single_channel), true); EXPECT_EQ(m_hdf_io->hlexists(dataset_two_channels), true); // read single channel matrix Mat single; m_hdf_io->dsread(single, dataset_single_channel); EXPECT_EQ(single.type(), m_single_channel.type()); EXPECT_EQ(single.size(), m_single_channel.size()); EXPECT_NEAR(norm(single-m_single_channel), 0, 1e-10); // read dual channel matrix Mat dual; m_hdf_io->dsread(dual, dataset_two_channels); EXPECT_EQ(dual.type(), m_two_channels.type()); EXPECT_EQ(dual.size(), m_two_channels.size()); EXPECT_NEAR(norm(dual-m_two_channels), 0, 1e-10); m_hdf_io->close(); }