Merge pull request #6544 from dcbaker/mpi-dependency-factory

Use DependencyFactory and ConfigToolDependency for MPI
pull/6815/head
Jussi Pakkanen 5 years ago committed by GitHub
commit 24227a9553
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GPG Key ID: 4AEE18F83AFDEB23
  1. 8
      docs/markdown/Dependencies.md
  2. 4
      mesonbuild/dependencies/__init__.py
  3. 23
      mesonbuild/dependencies/base.py
  4. 344
      mesonbuild/dependencies/mpi.py
  5. 4
      mesonbuild/dependencies/ui.py
  6. 10
      test cases/frameworks/17 mpi/meson.build
  7. 6
      test cases/frameworks/17 mpi/meson_options.txt

@ -411,7 +411,13 @@ not provide them, it will search for the standard wrapper executables,
`mpic`, `mpicxx`, `mpic++`, `mpifort`, `mpif90`, `mpif77`. If these
are not in your path, they can be specified by setting the standard
environment variables `MPICC`, `MPICXX`, `MPIFC`, `MPIF90`, or
`MPIF77`, during configuration.
`MPIF77`, during configuration. It will also try to use the Microsoft
implementation on windows via the `system` method.
`method` may be `auto`, `config-tool`, `pkg-config` or `system`.
*New in 0.54.0* The `config-tool` and `system` method values. Previous
versions would always try `pkg-config`, then `config-tool`, then `system`.
## NetCDF

@ -22,7 +22,7 @@ from .base import ( # noqa: F401
DependencyFactory)
from .dev import ValgrindDependency, gmock_factory, gtest_factory, llvm_factory, zlib_factory
from .coarrays import coarray_factory
from .mpi import MPIDependency
from .mpi import mpi_factory
from .scalapack import scalapack_factory
from .misc import (
BlocksDependency, OpenMPDependency, cups_factory, curses_factory, gpgme_factory,
@ -52,7 +52,7 @@ packages.update({
# per-file
'coarray': coarray_factory,
'hdf5': HDF5Dependency,
'mpi': MPIDependency,
'mpi': mpi_factory,
'scalapack': scalapack_factory,
# From misc:

@ -384,19 +384,32 @@ class NotFoundDependency(Dependency):
class ConfigToolDependency(ExternalDependency):
"""Class representing dependencies found using a config tool."""
"""Class representing dependencies found using a config tool.
Takes the following extra keys in kwargs that it uses internally:
:tools List[str]: A list of tool names to use
:version_arg str: The argument to pass to the tool to get it's version
:returncode_value int: The value of the correct returncode
Because some tools are stupid and don't return 0
"""
tools = None
tool_name = None
version_arg = '--version'
__strip_version = re.compile(r'^[0-9][0-9.]+')
def __init__(self, name, environment, kwargs, language: T.Optional[str] = None):
super().__init__('config-tool', environment, kwargs, language=language)
self.name = name
# You may want to overwrite the class version in some cases
self.tools = listify(kwargs.get('tools', self.tools))
if not self.tool_name:
self.tool_name = self.tools[0]
if 'version_arg' in kwargs:
self.version_arg = kwargs['version_arg']
req_version = kwargs.get('version', None)
tool, version = self.find_config(req_version)
tool, version = self.find_config(req_version, kwargs.get('returncode_value', 0))
self.config = tool
self.is_found = self.report_config(version, req_version)
if not self.is_found:
@ -415,7 +428,7 @@ class ConfigToolDependency(ExternalDependency):
return m.group(0).rstrip('.')
return version
def find_config(self, versions=None):
def find_config(self, versions=None, returncode: int = 0):
"""Helper method that searches for config tool binaries in PATH and
returns the one that best matches the given version requirements.
"""
@ -444,10 +457,10 @@ class ConfigToolDependency(ExternalDependency):
continue
tool = potential_bin.get_command()
try:
p, out = Popen_safe(tool + ['--version'])[:2]
p, out = Popen_safe(tool + [self.version_arg])[:2]
except (FileNotFoundError, PermissionError):
continue
if p.returncode != 0:
if p.returncode != returncode:
continue
out = self._sanitize_version(out.strip())

@ -12,111 +12,90 @@
# See the License for the specific language governing permissions and
# limitations under the License.
import functools
import typing as T
import os
import re
import subprocess
from .. import mlog
from .. import mesonlib
from ..mesonlib import split_args, listify
from .base import (DependencyMethods, PkgConfigDependency, factory_methods,
ConfigToolDependency, detect_compiler, ExternalDependency)
from ..environment import detect_cpu_family
from .base import (DependencyException, DependencyMethods, ExternalDependency, ExternalProgram,
PkgConfigDependency)
if T.TYPE_CHECKING:
from .base import DependencyType
from ..compilers import Compiler
from ..environment import Environment, MachineChoice
class MPIDependency(ExternalDependency):
def __init__(self, environment, kwargs: dict):
language = kwargs.get('language', 'c')
super().__init__('mpi', environment, kwargs, language=language)
kwargs['required'] = False
kwargs['silent'] = True
self.is_found = False
methods = listify(self.methods)
@factory_methods({DependencyMethods.PKGCONFIG, DependencyMethods.CONFIG_TOOL, DependencyMethods.SYSTEM})
def mpi_factory(env: 'Environment', for_machine: 'MachineChoice',
kwargs: T.Dict[str, T.Any], methods: T.List[DependencyMethods]) -> T.List['DependencyType']:
language = kwargs.get('language', 'c')
if language not in {'c', 'cpp', 'fortran'}:
# OpenMPI doesn't work without any other languages
return []
env_vars = []
default_wrappers = []
pkgconfig_files = []
candidates = []
compiler = detect_compiler('mpi', env, for_machine, language)
compiler_is_intel = compiler.get_id() in {'intel', 'intel-cl'}
# Only OpenMPI has pkg-config, and it doesn't work with the intel compilers
if DependencyMethods.PKGCONFIG in methods and not compiler_is_intel:
pkg_name = None
if language == 'c':
cid = environment.detect_c_compiler(self.for_machine).get_id()
if cid in ('intel', 'intel-cl'):
env_vars.append('I_MPI_CC')
# IntelMPI doesn't have .pc files
default_wrappers.append('mpiicc')
else:
env_vars.append('MPICC')
pkgconfig_files.append('ompi-c')
default_wrappers.append('mpicc')
pkg_name = 'ompi-c'
elif language == 'cpp':
cid = environment.detect_cpp_compiler(self.for_machine).get_id()
if cid in ('intel', 'intel-cl'):
env_vars.append('I_MPI_CXX')
# IntelMPI doesn't have .pc files
default_wrappers.append('mpiicpc')
else:
env_vars.append('MPICXX')
pkgconfig_files.append('ompi-cxx')
default_wrappers += ['mpic++', 'mpicxx', 'mpiCC'] # these are not for intelmpi
pkg_name = 'ompi-cxx'
elif language == 'fortran':
cid = environment.detect_fortran_compiler(self.for_machine).get_id()
if cid in ('intel', 'intel-cl'):
env_vars.append('I_MPI_F90')
# IntelMPI doesn't have .pc files
default_wrappers.append('mpiifort')
else:
env_vars += ['MPIFC', 'MPIF90', 'MPIF77']
pkgconfig_files.append('ompi-fort')
default_wrappers += ['mpifort', 'mpif90', 'mpif77']
else:
raise DependencyException('Language {} is not supported with MPI.'.format(language))
if set([DependencyMethods.AUTO, DependencyMethods.PKGCONFIG]).intersection(methods):
for pkg in pkgconfig_files:
pkgdep = PkgConfigDependency(pkg, environment, kwargs, language=self.language)
if pkgdep.found():
self.compile_args = pkgdep.get_compile_args()
self.link_args = pkgdep.get_link_args()
self.version = pkgdep.get_version()
self.is_found = True
self.pcdep = pkgdep
return
if DependencyMethods.AUTO in methods:
for var in env_vars:
if var in os.environ:
wrappers = [os.environ[var]]
break
else:
# Or search for default wrappers.
wrappers = default_wrappers
for prog in wrappers:
# Note: Some use OpenMPI with Intel compilers on Linux
result = self._try_openmpi_wrapper(prog, cid)
if result is not None:
self.is_found = True
self.version = result[0]
self.compile_args = self._filter_compile_args(result[1])
self.link_args = self._filter_link_args(result[2], cid)
break
result = self._try_other_wrapper(prog, cid)
if result is not None:
self.is_found = True
self.version = result[0]
self.compile_args = self._filter_compile_args(result[1])
self.link_args = self._filter_link_args(result[2], cid)
break
if not self.is_found and mesonlib.is_windows():
# only Intel Fortran compiler is compatible with Microsoft MPI at this time.
if language == 'fortran' and cid != 'intel-cl':
return
result = self._try_msmpi()
if result is not None:
self.is_found = True
self.version, self.compile_args, self.link_args = result
return
pkg_name = 'ompi-fort'
candidates.append(functools.partial(
PkgConfigDependency, pkg_name, env, kwargs, language=language))
if DependencyMethods.CONFIG_TOOL in methods:
nwargs = kwargs.copy()
if compiler_is_intel:
if env.machines[for_machine].is_windows():
nwargs['version_arg'] = '-v'
nwargs['returncode_value'] = 3
if language == 'c':
tool_names = [os.environ.get('I_MPI_CC'), 'mpiicc']
elif language == 'cpp':
tool_names = [os.environ.get('I_MPI_CXX'), 'mpiicpc']
elif language == 'fortran':
tool_names = [os.environ.get('I_MPI_F90'), 'mpiifort']
cls = IntelMPIConfigToolDependency # type: T.Type[ConfigToolDependency]
else: # OpenMPI, which doesn't work with intel
#
# We try the environment variables for the tools first, but then
# fall back to the hardcoded names
if language == 'c':
tool_names = [os.environ.get('MPICC'), 'mpicc']
elif language == 'cpp':
tool_names = [os.environ.get('MPICXX'), 'mpic++', 'mpicxx', 'mpiCC']
elif language == 'fortran':
tool_names = [os.environ.get(e) for e in ['MPIFC', 'MPIF90', 'MPIF77']]
tool_names.extend(['mpifort', 'mpif90', 'mpif77'])
cls = OpenMPIConfigToolDependency
tool_names = [t for t in tool_names if t] # remove empty environment variables
assert tool_names
nwargs['tools'] = tool_names
candidates.append(functools.partial(
cls, tool_names[0], env, nwargs, language=language))
if DependencyMethods.SYSTEM in methods:
candidates.append(functools.partial(
MSMPIDependency, 'msmpi', env, kwargs, language=language))
return candidates
class _MPIConfigToolDependency(ConfigToolDependency):
def _filter_compile_args(self, args: T.Sequence[str]) -> T.List[str]:
"""
@ -142,7 +121,7 @@ class MPIDependency(ExternalDependency):
result.append(f)
return result
def _filter_link_args(self, args: T.Sequence[str], cid: str) -> T.List[str]:
def _filter_link_args(self, args: T.Sequence[str]) -> T.List[str]:
"""
MPI wrappers return a bunch of garbage args.
Drop -O2 and everything that is not needed.
@ -150,7 +129,7 @@ class MPIDependency(ExternalDependency):
result = []
include_next = False
for f in args:
if self._is_link_arg(f, cid):
if self._is_link_arg(f):
result.append(f)
if f in ('-L', '-Xlinker'):
include_next = True
@ -159,121 +138,94 @@ class MPIDependency(ExternalDependency):
result.append(f)
return result
@staticmethod
def _is_link_arg(f: str, cid: str) -> bool:
if cid == 'intel-cl':
def _is_link_arg(self, f: str) -> bool:
if self.clib_compiler.id == 'intel-cl':
return f == '/link' or f.startswith('/LIBPATH') or f.endswith('.lib') # always .lib whether static or dynamic
else:
return (f.startswith(('-L', '-l', '-Xlinker')) or
f == '-pthread' or
(f.startswith('-W') and f != '-Wall' and not f.startswith('-Werror')))
def _try_openmpi_wrapper(self, prog, cid: str):
# https://www.open-mpi.org/doc/v4.0/man1/mpifort.1.php
if cid == 'intel-cl': # IntelCl doesn't support OpenMPI
return None
prog = ExternalProgram(prog, silent=True)
if not prog.found():
return None
# compiler args
cmd = prog.get_command() + ['--showme:compile']
p = subprocess.run(cmd, stdout=subprocess.PIPE, stderr=subprocess.PIPE, universal_newlines=True, timeout=15)
if p.returncode != 0:
mlog.debug('Command', mlog.bold(cmd), 'failed to run:')
mlog.debug(mlog.bold('Standard output\n'), p.stdout)
mlog.debug(mlog.bold('Standard error\n'), p.stderr)
return None
cargs = split_args(p.stdout)
# link args
cmd = prog.get_command() + ['--showme:link']
p = subprocess.run(cmd, stdout=subprocess.PIPE, stderr=subprocess.PIPE, universal_newlines=True, timeout=15)
if p.returncode != 0:
mlog.debug('Command', mlog.bold(cmd), 'failed to run:')
mlog.debug(mlog.bold('Standard output\n'), p.stdout)
mlog.debug(mlog.bold('Standard error\n'), p.stderr)
return None
libs = split_args(p.stdout)
# version
cmd = prog.get_command() + ['--showme:version']
p = subprocess.run(cmd, stdout=subprocess.PIPE, stderr=subprocess.PIPE, universal_newlines=True, timeout=15)
if p.returncode != 0:
mlog.debug('Command', mlog.bold(cmd), 'failed to run:')
mlog.debug(mlog.bold('Standard output\n'), p.stdout)
mlog.debug(mlog.bold('Standard error\n'), p.stderr)
return None
v = re.search(r'\d+.\d+.\d+', p.stdout)
class IntelMPIConfigToolDependency(_MPIConfigToolDependency):
"""Wrapper around Intel's mpiicc and friends."""
version_arg = '-v' # --version is not the same as -v
def __init__(self, name: str, env: 'Environment', kwargs: T.Dict[str, T.Any],
language: T.Optional[str] = None):
super().__init__(name, env, kwargs, language=language)
if not self.is_found:
return
args = self.get_config_value(['-show'], 'link and compile args')
self.compile_args = self._filter_compile_args(args)
self.link_args = self._filter_link_args(args)
def _sanitize_version(self, out: str) -> str:
v = re.search(r'(\d{4}) Update (\d)', out)
if v:
version = v.group(0)
else:
version = None
return '{}.{}'.format(v.group(1), v.group(2))
return out
return version, cargs, libs
def _try_other_wrapper(self, prog, cid: str) -> T.Tuple[str, T.List[str], T.List[str]]:
prog = ExternalProgram(prog, silent=True)
if not prog.found():
return None
class OpenMPIConfigToolDependency(_MPIConfigToolDependency):
cmd = prog.get_command()
if cid == 'intel-cl':
cmd.append('/show')
else:
cmd.append('-show')
p = subprocess.run(cmd, stdout=subprocess.PIPE, stderr=subprocess.PIPE, universal_newlines=True, timeout=15)
if p.returncode != 0:
mlog.debug('Command', mlog.bold(cmd), 'failed to run:')
mlog.debug(mlog.bold('Standard output\n'), p.stdout)
mlog.debug(mlog.bold('Standard error\n'), p.stderr)
return None
version = None
stdout = p.stdout
if 'Intel(R) MPI Library' in p.stdout: # intel-cl: remove messy compiler logo
out = stdout.split('\n', 2)
version = out[0]
stdout = out[2]
if version is None:
p = subprocess.run(cmd + ['-v'], stdout=subprocess.PIPE, stderr=subprocess.PIPE, universal_newlines=True, timeout=15)
if p.returncode == 0:
version = p.stdout.split('\n', 1)[0]
args = split_args(stdout)
return version, args, args
def _try_msmpi(self) -> T.Tuple[str, T.List[str], T.List[str]]:
if self.language == 'cpp':
# MS-MPI does not support the C++ version of MPI, only the standard C API.
return None
if 'MSMPI_INC' not in os.environ:
return None
incdir = os.environ['MSMPI_INC']
"""Wrapper around OpenMPI mpicc and friends."""
version_arg = '--showme:version'
def __init__(self, name: str, env: 'Environment', kwargs: T.Dict[str, T.Any],
language: T.Optional[str] = None):
super().__init__(name, env, kwargs, language=language)
if not self.is_found:
return
c_args = self.get_config_value(['--showme:compile'], 'compile_args')
self.compile_args = self._filter_compile_args(c_args)
l_args = self.get_config_value(['--showme:link'], 'link_args')
self.link_args = self._filter_link_args(l_args)
def _sanitize_version(self, out: str) -> str:
v = re.search(r'\d+.\d+.\d+', out)
if v:
return v.group(0)
return out
class MSMPIDependency(ExternalDependency):
"""The Microsoft MPI."""
def __init__(self, name: str, env: 'Environment', kwargs: T.Dict[str, T.Any],
language: T.Optional[str] = None):
super().__init__(name, env, kwargs, language=language)
# MSMPI only supports the C API
if language not in {'c', 'fortran', None}:
self.is_found = False
return
# MSMPI is only for windows, obviously
if not self.env.machines[self.for_machine].is_windows():
return
incdir = os.environ.get('MSMPI_INC')
arch = detect_cpu_family(self.env.coredata.compilers.host)
libdir = None
if arch == 'x86':
if 'MSMPI_LIB32' not in os.environ:
return None
libdir = os.environ['MSMPI_LIB32']
libdir = os.environ.get('MSMPI_LIB32')
post = 'x86'
elif arch == 'x86_64':
if 'MSMPI_LIB64' not in os.environ:
return None
libdir = os.environ['MSMPI_LIB64']
libdir = os.environ.get('MSMPI_LIB64')
post = 'x64'
else:
return None
if self.language == 'fortran':
return (None,
['-I' + incdir, '-I' + os.path.join(incdir, post)],
[os.path.join(libdir, 'msmpi.lib'), os.path.join(libdir, 'msmpifec.lib')])
else:
return (None,
['-I' + incdir, '-I' + os.path.join(incdir, post)],
[os.path.join(libdir, 'msmpi.lib')])
if libdir is None or incdir is None:
self.is_found = False
return
@staticmethod
def get_methods():
return [DependencyMethods.AUTO, DependencyMethods.PKGCONFIG]
self.is_found = True
self.link_args = ['-l' + os.path.join(libdir, 'msmpi')]
self.compile_args = ['-I' + incdir, '-I' + os.path.join(incdir, post)]
if self.language == 'fortran':
self.link_args.append('-l' + os.path.join(libdir, 'msmpifec'))

@ -79,13 +79,13 @@ class GnuStepDependency(ConfigToolDependency):
['--gui-libs' if 'gui' in self.modules else '--base-libs'],
'link_args'))
def find_config(self, versions=None):
def find_config(self, versions=None, returncode: int = 0):
tool = [self.tools[0]]
try:
p, out = Popen_safe(tool + ['--help'])[:2]
except (FileNotFoundError, PermissionError):
return (None, None)
if p.returncode != 0:
if p.returncode != returncode:
return (None, None)
self.config = tool
found_version = self.detect_version()

@ -1,7 +1,9 @@
project('mpi', 'c', 'cpp', default_options: ['b_asneeded=false'])
method = get_option('method')
cc = meson.get_compiler('c')
mpic = dependency('mpi', language : 'c', required : false)
mpic = dependency('mpi', language : 'c', required : false, method : method)
if not mpic.found()
error('MESON_SKIP_TEST: MPI not found, skipping.')
endif
@ -14,7 +16,7 @@ test('MPI C', exec, timeout: 10)
# C++ MPI not supported by MS-MPI
cpp = meson.get_compiler('cpp')
mpicpp = dependency('mpi', language : 'cpp', required: false)
mpicpp = dependency('mpi', language : 'cpp', required: false, method : method)
if not cpp.links('''
#include <mpi.h>
#include <stdio.h>
@ -31,7 +33,7 @@ test('MPI C++', execpp, timeout: 10)
if add_languages('fortran', required : false)
fc = meson.get_compiler('fortran')
mpif = dependency('mpi', language : 'fortran', required: false)
mpif = dependency('mpi', language : 'fortran', required: false, method : method)
if not fc.links('use mpi; end', dependencies: mpif, name: 'Fortran MPI')
mpif = disabler()
endif
@ -46,5 +48,5 @@ endif
# Check we can apply a version constraint
if mpic.version() != 'unknown'
dependency('mpi', version: '>=@0@'.format(mpic.version()))
dependency('mpi', version: '>=@0@'.format(mpic.version()), method : method)
endif

@ -0,0 +1,6 @@
option(
'method',
type : 'combo',
choices : ['auto', 'pkg-config', 'config-tool', 'system'],
value : 'auto',
)
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